In 1948, Willink was appointed Master of Magdalene College, Cambridge, a post he held until 1966.
Willink was awarded an honorary LLD by the University of Melbourne in 1955
In 1957 Willink served as Chairman of the Inter-Departmental Committee on the Future Numbers of Medical Practitioners and Intakes of Medical Students.
Willink was knighted.
Willink's papers are held at Churchill College, Cambridge.
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